Analysis Report

1. General Info Data has been filtered and trimmed for quality Chimera removal and preclustering have been applied Quality info Group Reads Total 277,133 Scrapped 111,852 Good 165,281 source Quality/Barcode Group Reads d1.4 44,605 d3.5 24,622 d4.4 20,934 d5.5 15,517 d6.7 28,658 d8.2 17,055 d9.0 13,890 total 165,281 source Trimmed/Unique Group Reads d1.4 19,488 d3.5 9,338 d4.4 6,944 d5.5 6,243 d6.7 9,529 d8.2 7,623 d9.0 6,437 total 65,602 source Unique/Aligned Group Reads d1.4 9,192 d3.5 4,458 d4.4 3,258 d5.5 2,819 d6.7 3,951 d8.2 3,419 d9.0 2,987 total 30,084 source Good/Barcode Group Reads D1.4a 11,955 D1.4b 12,027 D3.5 13,579 D4.4 11,256 D5.5 7,496 D6.7 14,225 D8.2 8,627 D9.0 7,315 total 86,480 source 2. Classification Classification against the SILVA gold aligned genes. The label ?.x means unclassified with the given lineage. Classifications with differences of less than 0.5% are not reported larger larger larger larger larger larger larger larger 3. Alpha diversity Calculators for community membership and structure. larger larger 5. Collector and rarefaction Fixed scale plots allow comparisons across samples. Free scale plots expand to full range larger larger larger larger 6. Shared Trees Similarity measures for community membership and structure (normalized by sample size): Bray-Curtis similarity: total number of species that are unique to any one of the two groups divided by the total number of species over the two site Jaccard similarity: size of intersection divided by the size of union larger larger larger